Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT1G05805.1
Element type:transcript
Description:basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Comment:basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G43140.2); Has 2662 Blast hits to 2007 proteins in 137 species: Archae - 2; Bacteria - 54; Metazoa - 424; Fungi - 144; Plants - 1472; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).
Contig:chr1_pseudomolecule_TAIR9

Gene features
Size (bp):2921
Spliced size (bp):1425
Start:1744773
Stop:1747693
Subelements:
TypeStartStopSize
5'UTR17070
exon1545545
exon14381730293
exon19892117129
exon2264232966
exon2421248969
exon25992921323
3'UTR26562921266
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT1G05805.1
View sequence: CDS
spliced
unspliced
Protein

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