Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT1G49480.1
Element type:transcript
Description:related to vernalization1 1
Comment:related to vernalization1 1 (RTV1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G18990.1); Has 354 Blast hits to 329 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 352; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Contig:chr1_pseudomolecule_TAIR9

Gene features
Size (bp):2468
Spliced size (bp):1598
Start:18316645
Stop:18314178
Subelements:
TypeStartStopSize
5'UTR111851185
exon1337337
exon10241417394
exon15031702200
exon18022468667
3'UTR20512468418
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT1G49480.1
View sequence: CDS
spliced
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Protein

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