Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT1G49780.1
Element type:transcript
Description:plant U-box 26
Comment:plant U-box 26 (PUB26); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 25 (TAIR:AT3G19380.1); Has 2464 Blast hits to 2403 proteins in 144 species: Archae - 0; Bacteria - 20; Metazoa - 134; Fungi - 16; Plants - 2081; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).
Contig:chr1_pseudomolecule_TAIR9

Gene features
Size (bp):1414
Spliced size (bp):1414
Start:18430319
Stop:18428906
Subelements:
TypeStartStopSize
5'UTR13030
exon114141414
3'UTR12971414118
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT1G49780.1
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spliced
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Protein

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