Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT1G76580.1
Element type:transcript
Description:Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Comment:Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 4275 Blast hits to 1172 proteins in 134 species: Archae - 0; Bacteria - 31; Metazoa - 161; Fungi - 128; Plants - 962; Viruses - 0; Other Eukaryotes - 2993 (source: NCBI BLink).
Contig:chr1_pseudomolecule_TAIR9

Gene features
Size (bp):4684
Spliced size (bp):3686
Start:28734234
Stop:28738917
Subelements:
TypeStartStopSize
5'UTR1366366
exon1206206
exon32037556
exon472845374
exon9411137197
exon12282048821
exon2137221175
exon23042411108
exon25012612112
exon27002835136
exon29163060145
exon31533734582
exon38114684874
3'UTR42194684466
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT1G76580.1
View sequence: CDS
spliced
unspliced
Protein

Download
Genetic element download:Download Form
Web Start (help)
Web Service(WSDL)

Navigable Viewer
JBrowse