Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT2G42300.1
Element type:transcript
Description:basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Comment:basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G57800.2); Has 2090 Blast hits to 2084 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 16; Plants - 2063; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Contig:chr2_pseudomolecule_TAIR9

Gene features
Size (bp):3686
Spliced size (bp):1576
Start:17621156
Stop:17624841
Subelements:
TypeStartStopSize
5'UTR1386386
exon1875875
exon9591072114
exon1154121966
exon2286235469
exon2479255072
exon33073686380
3'UTR34813686206
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT2G42300.1
View sequence: CDS
spliced
unspliced
Protein

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