Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT3G07340.1
Element type:transcript
Description:basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Comment:basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink).
Contig:chr3_pseudomolecule_TAIR9

Gene features
Size (bp):2572
Spliced size (bp):1842
Start:2343470
Stop:2340899
Subelements:
TypeStartStopSize
5'UTR1182182
exon1851851
exon9321084153
exon1211127666
exon1366143469
exon1560163172
exon17551970216
exon2062214382
exon22402572333
3'UTR22842572289
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT3G07340.1
View sequence: CDS
spliced
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Protein

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