Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT3G12480.1
Element type:transcript
Description:nuclear factor Y, subunit C11
Comment:"nuclear factor Y, subunit C11" (NF-YC11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G19490.1); Has 1099 Blast hits to 1099 proteins in 222 species: Archae - 0; Bacteria - 6; Metazoa - 308; Fungi - 314; Plants - 371; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).
Contig:chr3_pseudomolecule_TAIR9

Gene features
Size (bp):2696
Spliced size (bp):1364
Start:3957777
Stop:3960472
Subelements:
TypeStartStopSize
5'UTR1288288
exon1321321
exon1059113173
exon1223131694
exon16351769135
exon1858191558
exon20142696683
3'UTR25032696194
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT3G12480.1
View sequence: CDS
spliced
unspliced
Protein

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