Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT3G53680.1
Element type:transcript
Description:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Comment:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G37520.1); Has 3364 Blast hits to 2813 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 239; Plants - 706; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink).
Contig:chr3_pseudomolecule_TAIR9

Gene features
Size (bp):4550
Spliced size (bp):2526
Start:19897412
Stop:19892863
Subelements:
TypeStartStopSize
exon1624624
exon71278069
exon8751073199
exon1215129379
exon14591587129
exon1691175666
exon1855193682
exon2030208960
exon2187223953
exon23142483170
exon27492926178
exon3009306658
exon3154321057
exon32863531246
exon3668372962
exon3827388357
exon3978407194
exon41684308141
exon44494550102
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT3G53680.1
View sequence: CDS
spliced
unspliced
Protein

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