Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT3G57520.1
Element type:transcript
Description:seed imbibition 2
Comment:seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 528 Blast hits to 504 proteins in 147 species: Archae - 29; Bacteria - 95; Metazoa - 0; Fungi - 82; Plants - 312; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Contig:chr3_pseudomolecule_TAIR9

Gene features
Size (bp):4394
Spliced size (bp):2761
Start:21293158
Stop:21288765
Subelements:
TypeStartStopSize
5'UTR1464464
exon1197197
exon440655216
exon7711015245
exon1112120291
exon1302135049
exon1440153192
exon16331740108
exon20472169123
exon22872839553
exon2920298768
exon30963230135
exon33303547218
exon3642373089
exon38184394577
3'UTR41784394217
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT3G57520.1
View sequence: CDS
spliced
unspliced
Protein

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