Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT3G57800.1
Element type:transcript
Description:basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Comment:basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 1234 Blast hits to 1224 proteins in 46 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 4; Plants - 1221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Contig:chr3_pseudomolecule_TAIR9

Gene features
Size (bp):3824
Spliced size (bp):1817
Start:21411612
Stop:21407789
Subelements:
TypeStartStopSize
5'UTR1291291
exon1837837
exon9101023114
exon1115118066
exon1677177296
exon2043208745
exon2318238669
exon2535260672
exon33073824518
3'UTR35803824245
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT3G57800.1
View sequence: CDS
spliced
unspliced
Protein

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