Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT5G14640.1
Element type:transcript
Description:shaggy-like kinase 13
Comment:shaggy-like kinase 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Contig:chr5_pseudomolecule_TAIR9

Gene features
Size (bp):3203
Spliced size (bp):1719
Start:4722279
Stop:4719077
Subelements:
TypeStartStopSize
5'UTR1507507
exon1180180
exon475624150
exon73182393
exon1003106260
exon11581430273
exon1534160875
exon1690174657
exon18652005141
exon2119216951
exon2312240796
exon2491257484
exon26562758103
exon28483203356
3'UTR29313203273
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT5G14640.1
View sequence: CDS
spliced
unspliced
Protein

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