Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT5G49420.1
Element type:transcript
Description:MADS-box transcription factor family protein
Comment:MADS-box transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: antipodal cell, pollen tube; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G38620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Contig:chr5_pseudomolecule_TAIR9

Gene features
Size (bp):1497
Spliced size (bp):1300
Start:20036170
Stop:20034674
Subelements:
TypeStartStopSize
exon110581058
3'UTR10061497492
exon12561497242
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT5G49420.1
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spliced
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Protein

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