Helmholtz Zentrum München - German Research Center for Environmental Health

Element Report

Name: AT5G60940.1
Element type:transcript
Description:Transducin/WD40 repeat-like superfamily protein
Comment:Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Contig:chr5_pseudomolecule_TAIR9

Gene features
Size (bp):2835
Spliced size (bp):1561
Start:24522978
Stop:24525812
Subelements:
TypeStartStopSize
5'UTR1114114
exon1219219
exon43551884
exon601710110
exon80387270
exon989107284
exon1171124878
exon1336140671
exon1508155952
exon1649170658
exon18231923101
exon20232177155
exon22732381109
exon24662835370
3'UTR26792835157
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TAIR
References:GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT5G60940.1
View sequence: CDS
spliced
unspliced
Protein

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