Helmholtz Zentrum München - German Research Center for Environmental Health

Tomato genome data sources

Sequencing Status

The current sequencing status of the tomato project can be seen on the site of the International Tomato Sequencing Project.

Annotation

Annotation on the finished genomic sequences was performed at PGSB using an in-house gene prediction pipeline with additional manual curation. De novo genefinder training and evaluation is currently ongoing. Thus please consider the data represented as PRELIMINARY.

Genome Sequences

TomDB aims to integrate all publically available sequence data generated within the international and the EU-SOL genome sequencing project (www.eu-sol.net).

Update

TomDB is updated on a regularly basis.Whenever new Tomato genome sequences become available they will be integrated into TomDB. Gene prediction will be performed by multiple partnering centers as well as using a PGSB in-house prediction pipeline.