Helmholtz Zentrum München - German Research Center for Environmental Health

The Arabidopsis Information Resource (The Arabidopsis Information Resource)
Provider:Carnegie Institution for Science (The Arabidopsis Information Resource)
Resource:TAIR (TAIR (Database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. Data available includes the complete genome sequence along with gene structure, gene product information, metabolism, gene expression, DNA and seed stocks, genome maps, genetic and physical markers, publications, and information about the Arabidopsis research community. Gene product function data is updated every week from the latest published research literature and community data submissions. TAIR also provides extensive linkouts from our data pages to other Arabidopsis resources. The data in TAIR can be searched, viewed and analyzed with our tools. Our datasets can also be downloaded. In addition, pages on news, job postings, conference announcements, Arabidopsis lab protocols, and useful links are provided.))
Organism:Arabidopsis thaliana (thale cress, mouse ear cress)
URL:http://www.arabidopsis.org/
Release:Latest genome release: TAIR10, November 2010
Source URL:
Last Update:Gene function updates on a weekly basis
Data type:genomic,proteomic,community
Tools:seqviewer,gbrowse,blast,wu-blast,pattern,matching,chromosome,map,viewer,more
Keywords:genetic,molecular,biology,gene,genome,structure,product,metabolism,expression,gold,standard,authority,dna,seed,stock,map,marker,physical,publication,sequence
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Description of the fields (ReadMe)
Provider: Details of the data providers institution (such as research center, university, etc.).
Resource: Details of the particular resource provided. This will be a system name such as Phytozome.
Organism: Scientific (and common) species name. This can contain more than one entry.
URL: Primary URL of the particular instance. (Should point to the entry page of the instance such as to the Arabidopsis thal. entry page in Phytozome.)
Release: This field can hold a release or version tag for the data within an instance. Often this will be an annotation or assembly version, such as TAIR10.
Source URL: This field can hold a source URL for the data within an instance. Often the data within an instance are derivative and were obtained from another primary resource. This URL can then point towards the original data resource.
Last Update: This field can hold a release version or last update data for the instance and/or resource. Many resources are built in releases (such as TAIR or Phytozome in version 8.0) or updated regularly.
Data type: This field describes the type of data that is stored or provided from an instance, such as genomic, variation or expression.
Tools: This field can hold the names of useful tools provided within the instance or resources such as GBrowse.
Keywords: Keywords for search.

 

The transPLANT project is funded by the European Commission within its 7th Framework Programme, under the thematic area "Infrastructures", contract number 283496.

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